Repository for the NGS summer course at Aarhus university

Time-series RNA-Seq and data-driven network inference unveil dynamic cell phenotypes in Chronic Lymphocytic Leukaemia

Nextflow DSL2 pipeline for bulk mRNA-seq differential expression analysis using the limma-voom statistical framework with integrated batch correction, pathway analysis, and power assessment.

Personal bioinformatics portfolio with projects on scRNA-seq, biomarker discovery, and gene/cell therapy analytics.

Command-line tool for fast, automated downloading of raw FASTQ files from ENA and/or GEO, supporting variety of NGS datasets, including bulk and single-cell RNA-seq.

RNA sequencing, bioinformatics, and data analysis involved in the Itch project for Dr. Martha Bhattacharya's Lab at the University of Arizona